Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952690.1_cds_XP_016492244.1_82475
CDS Infomation

[gene=LOC107811765] [db_xref=GeneID:107811765] [protein=transcription factor PIF4-like] [protein_id=XP_016492244.1] [location=complement(join(101788..101877,101990..102292,102532..102597,103208..103273,103370..103468,103551..104301,104392..104462))] [gbkey=CDS]
Sequence

ATGAATCCATGTCTGCCTGAATGGAATATTGAGGCTGAACTTTCTGTTCCACATCAAAAG
AAGCCAATAGGATTTGATCATGAGCTAGTGGAGCTGTTATGGCGAAACGGAGAGGTAGTA
TTACACAGCCAAACACATAAAAAACAGCCAGGTTATGATCCTAATGAATGCAGACAGTTT
AACAAACATGATCAACAAACAATAAGAGATGTTGTCTCCTGTGGAAATCACACCAATTTG
ATTCAAGATGATGAAACCATCTCGTGGCTTAACTGTCCTATCGATGAATCGTTTGAGAAA
GAATTTTGTTCCCCTTTCTTATCTGAAATTTCAACAAATCCAATTGAGGTTGATAAGTCA
ATTAGGCAATCAGAGGACAATAAGGCTTTCAAGTTTGATACATTAGAGATCAATAATGTT
TTTCCACATTCACATCATTCCGGTTTTGATCCAAATCCAATGCCCCCTCCAAGATTTCAC
AACACTGGATCAGCTAAGCAGCATAATGTTAAGGAGGGGTCCGTGATGACAGTTGGTTCA
AGCCACTGTGGTAGCAATCAAGTTGCTATTGATGCGGATACTAGCCGATTTTCAAGCAGT
GCAAATATAGGGTTGTCTGCAGCAATGATCACTGACTATACTGGTAAAGTTAGTCCGCAA
AGTGATACAATGGACCGAGACACGTTTGAACCAGCTAACACATCATCTTCAGGCGGATCG
GGTAGTAGTTATGCTAGAACATGCAATCTATCTGCAGCAACCAATAGTCAAAGCCACAAA
AGGAAAAGTAGAGATGGTGAAGAACCAGAATGTCAAAGTAAAGCAGGTGAGCTAGAATCA
GCTGGAGGAAACAAGTCAGCCCAAAAATCTGGAACTGCGCGTAGGAGCCGTGCTGCAGAA
GTACATAACCTCTCTGAAAGGAGAAGGAGGGATAGAATCAATGAGAAGATGAAGGCCTTG
CAAGAGCTTCTTCCTCACTCTACTAAGACAGATAAAGCATCAATGCTGGATGAGGCTATT
GAATACTTGAAGTCACTTCAGATGCAACTTCAGATGATGTGGATGGGAAGTGGCATGGCA
TCGATGATGTTTCCTGGTGTCCAACACTACATGTCGAGAATGGGAATGGGGATGGGTCCG
CCAACGGTTCCTTCCATTCACAATGCCATGCATTTAGCTAGGCTTCCTTTAGTTGATTCA
GCAATTCCTTTGAATCCAGCTGCTCCTAATCAAGCTGCAATGTGCCAGAATTCAATGCTG
AATTCGGTTAACTATCAACGCCATTTGCAGAATCCCAACTTTCAAGACCAATATGCCAGT
TACATGGGGTTCCATCCACTTCAAGGTGCTTCTCAGCAAATGAACATTTTTGGCTTAGGT
TCACAAACAGCACAGCAAAGTCAGCAGTTATCACATCCTACTAATAGTAATGCACCCAAC
ACTTGA

Peptide Sequence

PEP ID

XP_016492244.1
PEP Infomation

PREDICTED: transcription factor PIF4-like [Nicotiana tabacum]
Sequence

MNPCLPEWNIEAELSVPHQKKPIGFDHELVELLWRNGEVVLHSQTHKKQPGYDPNECRQF
NKHDQQTIRDVVSCGNHTNLIQDDETISWLNCPIDESFEKEFCSPFLSEISTNPIEVDKS
IRQSEDNKAFKFDTLEINNVFPHSHHSGFDPNPMPPPRFHNTGSAKQHNVKEGSVMTVGS
SHCGSNQVAIDADTSRFSSSANIGLSAAMITDYTGKVSPQSDTMDRDTFEPANTSSSGGS
GSSYARTCNLSAATNSQSHKRKSRDGEEPECQSKAGELESAGGNKSAQKSGTARRSRAAE
VHNLSERRRRDRINEKMKALQELLPHSTKTDKASMLDEAIEYLKSLQMQLQMMWMGSGMA
SMMFPGVQHYMSRMGMGMGPPTVPSIHNAMHLARLPLVDSAIPLNPAAPNQAAMCQNSML
NSVNYQRHLQNPNFQDQYASYMGFHPLQGASQQMNIFGLGSQTAQQSQQLSHPTNSNAPN
T

Transcript Sequence

Gene sequence data has not been registered.